STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQT57012.13-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
KQT57023.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
sbcD
Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
    
 0.933
KQT56264.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.929
KQT57239.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.928
KQT47697.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.898
KQT45442.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.896
KQT61451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.887
KQT61092.1
NADH-quinone oxidoreductase chain 13; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.865
KQT46648.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.849
KQT61586.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.839
Your Current Organism:
Methylobacterium sp. Leaf456
NCBI taxonomy Id: 1736382
Other names: M. sp. Leaf456
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