KRE25987.1 protein (Agromyces sp. Soil535) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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[Homology]

Score

KRE25987.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)

Predicted Functional Partners:

KRE21148.1

0.662

KRE30971.1

0.637

KRE29996.1

0.580

KRE25967.1

0.579

KRE31498.1

0.557

KRE25894.1

0.546

KRE21847.1

0.514

KRE21933.1

0.498

KRE31488.1

0.497

KRE28562.1

0.489

Your Current Organism:

Agromyces sp. Soil535

NCBI taxonomy Id: 1736390
Other names: A. sp. Soil535

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRE21148.1	KRE21847.1	ASG80_13900	ASG80_12210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.663
KRE21148.1	KRE21933.1	ASG80_13900	ASG80_12405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
KRE21148.1	KRE25967.1	ASG80_13900	ASG80_03840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
KRE21148.1	KRE25987.1	ASG80_13900	ASG80_03960	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.662
KRE21148.1	KRE28562.1	ASG80_13900	ASG80_21255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
KRE21148.1	KRE29996.1	ASG80_13900	ASG80_18890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
KRE21148.1	KRE30971.1	ASG80_13900	ASG80_00215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KRE21148.1	KRE31488.1	ASG80_13900	ASG80_00220	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
KRE21847.1	KRE21148.1	ASG80_12210	ASG80_13900	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.663
KRE21847.1	KRE25894.1	ASG80_12210	ASG80_03400	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KRE21847.1	KRE25967.1	ASG80_12210	ASG80_03840	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.453
KRE21847.1	KRE25987.1	ASG80_12210	ASG80_03960	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
KRE21847.1	KRE30971.1	ASG80_12210	ASG80_00215	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
KRE21933.1	KRE21148.1	ASG80_12405	ASG80_13900	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
KRE21933.1	KRE25967.1	ASG80_12405	ASG80_03840	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
KRE21933.1	KRE25987.1	ASG80_12405	ASG80_03960	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
KRE21933.1	KRE29996.1	ASG80_12405	ASG80_18890	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
KRE21933.1	KRE30971.1	ASG80_12405	ASG80_00215	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
KRE21933.1	KRE31488.1	ASG80_12405	ASG80_00220	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
KRE25894.1	KRE21847.1	ASG80_03400	ASG80_12210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490