STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRE28460.1Dihydrodipicolinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)    
Predicted Functional Partners:
KRE28459.1
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.954
KRE28458.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
KRE25561.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
KRE25562.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
KRE27057.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.702
KRE25563.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
KRE34824.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
KRE34749.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
KRE28506.1
Dihydrodipicolinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.618
KRE30658.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.602
Your Current Organism:
Mycobacterium sp. Soil538
NCBI taxonomy Id: 1736391
Other names: M. sp. Soil538
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.