STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASG71_013253-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
KRE81685.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.867
KRE77496.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.867
KRE81684.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.866
KRE77495.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.866
KRE78696.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.802
KRE80167.1
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.731
KRE80170.1
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.662
KRE81738.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.660
KRE81589.1
ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.652
KRE81836.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.652
Your Current Organism:
Arthrobacter sp. Soil763
NCBI taxonomy Id: 1736402
Other names: A. sp. Soil763
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