STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRE87400.1Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (857 aa)    
Predicted Functional Partners:
KRE87495.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
KRE87401.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.886
KRE83615.1
NAD(P)H-flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.855
KRE87504.1
Copper resistance protein CopA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.848
KRE85834.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.797
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.748
KRE87894.1
Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.704
KRE87191.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.702
KRE86867.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.696
KRE87369.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.691
Your Current Organism:
Rhodanobacter sp. Soil772
NCBI taxonomy Id: 1736406
Other names: R. sp. Soil772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.