STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRF16503.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)    
Predicted Functional Partners:
KRF16504.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.951
KRF19069.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
KRF16502.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.757
KRF19062.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.725
KRF19053.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.576
KRF16501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.553
KRF13895.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.545
KRF19316.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.477
Your Current Organism:
Nocardioides sp. Soil797
NCBI taxonomy Id: 1736413
Other names: N. sp. Soil797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.