STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX58746.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)    
Predicted Functional Partners:
KQX58745.1
Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.845
KQX53327.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.824
KQX58744.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.744
KQX59546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
ubiX
Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.712
KQX58043.1
Menaquinone biosynthesis decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family.
  
 
 0.702
KQX59398.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.654
KQX59686.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.654
KQX59484.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.654
KQX59516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.654
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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