STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX58889.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
KQX53490.1
TolB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.954
KQX58890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.903
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.738
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.718
KQX59238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.692
KQX58897.1
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.685
KQX58891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.657
KQX58892.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.656
KQX58896.1
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
   0.647
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.