Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KQX52824.1 | KQX53567.1 | ASD33_06095 | ASD33_10460 | Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.867 |
| KQX52824.1 | hutH | ASD33_06095 | ASD33_01240 | Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| KQX52824.1 | hutI | ASD33_06095 | ASD33_25155 | Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Imidazolonepropionase; Catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.932 |
| KQX52824.1 | hutU | ASD33_06095 | ASD33_25170 | Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.572 |
| KQX53567.1 | KQX52824.1 | ASD33_10460 | ASD33_06095 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | 0.867 |
| KQX53567.1 | KQX57802.1 | ASD33_10460 | ASD33_25160 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.689 |
| KQX53567.1 | hutH | ASD33_10460 | ASD33_01240 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.871 |
| KQX53567.1 | hutU | ASD33_10460 | ASD33_25170 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.963 |
| KQX57802.1 | KQX53567.1 | ASD33_25160 | ASD33_10460 | N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.689 |
| KQX57802.1 | hutH | ASD33_25160 | ASD33_01240 | N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.824 |
| KQX57802.1 | hutI | ASD33_25160 | ASD33_25155 | N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Imidazolonepropionase; Catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| KQX57802.1 | hutU | ASD33_25160 | ASD33_25170 | N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.971 |
| KQX57960.1 | aroC | ASD33_26090 | ASD33_19955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.650 |
| KQX57960.1 | hisD | ASD33_26090 | ASD33_09465 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.408 |
| KQX57960.1 | hutH | ASD33_26090 | ASD33_01240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.949 |
| aroC | KQX57960.1 | ASD33_19955 | ASD33_26090 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.650 |
| aroC | hisC | ASD33_19955 | ASD33_09470 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.824 |
| aroC | hutH | ASD33_19955 | ASD33_01240 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| aroC | pat | ASD33_19955 | ASD33_16920 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.755 |
| hisC | aroC | ASD33_09470 | ASD33_19955 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.824 |
page 1 of 3