STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX59200.1Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
KQX59199.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.832
KQX58854.1
Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.620
KQX50604.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.620
KQX51077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.550
cobT-2
5,6-dimethylbenzimidazole synthase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
   
 
  0.514
KQX50648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.477
KQX46128.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.477
KQX49446.1
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.456
KQX50640.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.453
KQX50811.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.453
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.