STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX59392.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
KQX47274.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.787
KQX51503.1
FxsB family radical SAM/SPASM domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.787
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.710
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.707
KQX59393.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.706
KQX53445.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.701
KQX59394.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.685
KQX59391.1
Copper homeostasis protein CutC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CutC family.
     
 0.684
egtB
Sulfatase-modifying factor 1; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family.
  
   0.683
ASD33_28325
Sulfatase modifying factor 1 (C-alpha-formyglycine-generating enzyme 1); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.683
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.