STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX52658.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)    
Predicted Functional Partners:
KQX53639.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.796
KQX53626.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.793
KQX50115.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.789
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.762
KQX59508.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.760
KQX56197.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.757
KQX47418.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.756
KQX47717.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.748
KQX47904.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.737
KQX46121.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.732
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.