STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX52858.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)    
Predicted Functional Partners:
KQX52791.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.856
KQX52849.1
5-deoxy-glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.835
KQX53648.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.559
KQX51068.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
KQX56292.1
Condensation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
KQX54707.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
KQX52239.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
KQX49936.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.461
KQX57854.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.439
KQX55863.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.439
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.