STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX53673.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (941 aa)    
Predicted Functional Partners:
KQX52887.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.992
KQX55814.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.934
KQX55411.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.905
KQX52888.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.889
KQX52889.1
Globin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
KQX52886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.694
KQX58872.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.693
KQX59260.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.693
ASD33_04685
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.693
KQX49541.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.693
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.