STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX53074.1Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology. (1230 aa)    
Predicted Functional Partners:
KQX55736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.736
KQX53003.1
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.694
KQX48154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
KQX53570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
KQX49993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
KQX50670.1
NADH-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
KQX49517.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
KQX57999.1
TrmB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.528
KQX52995.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
ASD33_02780
Leupeptin-inactivating enzyme 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.515
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.