STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX53453.1Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)    
Predicted Functional Partners:
KQX53454.1
Lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.965
KQX53420.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.904
KQX52812.1
Alcaligin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.852
KQX57960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.847
KQX56363.1
IucA/IucC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.816
KQX53662.1
IucA/IucC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.814
KQX56361.1
2,4-diaminobutyrate 4-aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 0.810
KQX52811.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.799
KQX53568.1
Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.788
ectA
Hypothetical protein; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.
    
  0.782
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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