STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX53457.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
KQX53462.1
Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.914
KQX49802.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.885
KQX47234.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.875
KQX59664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.874
KQX50600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.874
KQX50990.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.874
KQX58051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.874
KQX56302.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.874
KQX54964.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.874
KQX58082.1
Bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.721
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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