STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX53477.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
KQX53751.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.978
KQX46357.1
Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.900
KQX54702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.772
KQX53478.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
KQX53750.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.673
KQX53476.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.667
KQX57011.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
KQX57012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
KQX58844.1
Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.433
KQX53541.1
Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.