STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX53567.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.963
hutH
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.871
KQX52824.1
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
  
 
 0.867
KQX53765.1
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.738
KQX57802.1
N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.689
KQX53566.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.611
KQX53570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
KQX50071.1
Ectoine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
ectA
Hypothetical protein; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.
       0.592
KQX47260.1
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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