STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX53568.1Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
KQX53569.1
Penicillin amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.995
KQX53662.1
IucA/IucC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.938
KQX52812.1
Alcaligin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.936
KQX53454.1
Lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.936
KQX56363.1
IucA/IucC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.885
KQX52813.1
Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.799
KQX53453.1
Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.788
KQX56362.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.771
ASD33_28140
Transporter; disrupted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.713
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
  0.692
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.