STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX50771.1General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (57 aa)    
Predicted Functional Partners:
KQX49446.1
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.853
KQX50596.1
Dodecin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.703
KQX50640.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.620
KQX50811.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.620
KQX50043.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.542
KQX53612.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.521
KQX55804.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.515
KQX53271.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.509
KQX52667.1
Teichoic acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.498
KQX50866.1
Teichoic acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.498
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.