STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX50891.1Sphingomyelin phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)    
Predicted Functional Partners:
KQX50889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
KQX59458.1
PTS alpha-glucoside transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.696
KQX53473.1
Sheath polysaccharide-degrading enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.675
KQX47874.1
Sphingosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.663
KQX58087.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.654
KQX53243.1
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.641
KQX53730.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.627
KQX53528.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.627
KQX53563.1
Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.627
KQX47546.1
Aminotransferase class V; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.627
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.