KQX50916.1 protein (Streptomyces sp. Root1304)

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Score

KQX50916.1

ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)

Predicted Functional Partners:

KQX50915.1

0.997

KQX47302.1

0.991

KQX49477.1

0.987

KQX47495.1

0.987

polA

0.960

KQX47881.1

0.953

ku

0.927

KQX57915.1

0.848

KQX57027.1

0.848

KQX56171.1

0.840

Your Current Organism:

Streptomyces sp. Root1304

NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQX47302.1	KQX50915.1	ASD33_21050	ASD33_12935	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.895
KQX47302.1	KQX50916.1	ASD33_21050	ASD33_12940	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KQX47302.1	ku	ASD33_21050	ASD33_21055	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.988
KQX47495.1	KQX47881.1	ASD33_22210	ASD33_19305	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
KQX47495.1	KQX49477.1	ASD33_22210	ASD33_17195	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.936
KQX47495.1	KQX50916.1	ASD33_22210	ASD33_12940	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
KQX47495.1	KQX56171.1	ASD33_22210	ASD33_29380	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
KQX47495.1	KQX57027.1	ASD33_22210	ASD33_28720	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
KQX47495.1	KQX57915.1	ASD33_22210	ASD33_25815	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
KQX47495.1	polA	ASD33_22210	ASD33_09855	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.998
KQX47881.1	KQX47495.1	ASD33_19305	ASD33_22210	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
KQX47881.1	KQX49477.1	ASD33_19305	ASD33_17195	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.992
KQX47881.1	KQX50916.1	ASD33_19305	ASD33_12940	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KQX47881.1	KQX56171.1	ASD33_19305	ASD33_29380	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
KQX47881.1	KQX57027.1	ASD33_19305	ASD33_28720	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
KQX47881.1	KQX57915.1	ASD33_19305	ASD33_25815	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
KQX47881.1	polA	ASD33_19305	ASD33_09855	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.825
KQX49477.1	KQX47495.1	ASD33_17195	ASD33_22210	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
KQX49477.1	KQX47881.1	ASD33_17195	ASD33_19305	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
KQX49477.1	KQX50916.1	ASD33_17195	ASD33_12940	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987