STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX50924.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)    
Predicted Functional Partners:
KQX50923.1
AbaA-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.977
KQX50922.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.956
KQX50612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.796
KQX45614.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.777
KQX47716.1
Translation initiation factor IF-2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.773
KQX50144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.762
KQX53320.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
KQX58048.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
KQX48097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.741
KQX49812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.726
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.