STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX51005.1Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)    
Predicted Functional Partners:
KQX57048.1
Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.899
KQX57047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.776
KQX56998.1
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.738
KQX57045.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.722
KQX57049.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.696
KQX57046.1
Aminotransferase class III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.654
KQX50965.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
KQX57044.1
UL36 very large tegument protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
KQX56982.1
Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.470
KQX56980.1
Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.462
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.