Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ASD33_12520 | KQX49785.1 | ASD33_12520 | ASD33_14070 | Glutamate dehydrogenase; MBL fold metallo-hydrolase; disrupted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.912 |
| ASD33_12520 | KQX56927.1 | ASD33_12520 | ASD33_28115 | Glutamate dehydrogenase; MBL fold metallo-hydrolase; disrupted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.920 |
| ASD33_12520 | glsA | ASD33_12520 | ASD33_15420 | Glutamate dehydrogenase; MBL fold metallo-hydrolase; disrupted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. | 0.907 |
| ASD33_12520 | guaA | ASD33_12520 | ASD33_02005 | Glutamate dehydrogenase; MBL fold metallo-hydrolase; disrupted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.749 |
| KQX49785.1 | ASD33_12520 | ASD33_14070 | ASD33_12520 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Glutamate dehydrogenase; MBL fold metallo-hydrolase; disrupted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.912 |
| KQX49785.1 | KQX50120.1 | ASD33_14070 | ASD33_14075 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.791 |
| KQX49785.1 | KQX56927.1 | ASD33_14070 | ASD33_28115 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.818 |
| KQX49785.1 | KQX57373.1 | ASD33_14070 | ASD33_27130 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
| KQX49785.1 | glsA | ASD33_14070 | ASD33_15420 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. | 0.925 |
| KQX49785.1 | guaA | ASD33_14070 | ASD33_02005 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.821 |
| KQX49785.1 | murC | ASD33_14070 | ASD33_30985 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.874 |
| KQX49785.1 | murD | ASD33_14070 | ASD33_09305 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.982 |
| KQX49785.1 | murE | ASD33_14070 | ASD33_09290 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.840 |
| KQX49785.1 | murF | ASD33_14070 | ASD33_09295 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.883 |
| KQX50120.1 | KQX49785.1 | ASD33_14075 | ASD33_14070 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.791 |
| KQX56927.1 | ASD33_12520 | ASD33_28115 | ASD33_12520 | Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate dehydrogenase; MBL fold metallo-hydrolase; disrupted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.920 |
| KQX56927.1 | KQX49785.1 | ASD33_28115 | ASD33_14070 | Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.818 |
| KQX56927.1 | glsA | ASD33_28115 | ASD33_15420 | Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. | 0.907 |
| KQX56927.1 | guaA | ASD33_28115 | ASD33_02005 | Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.862 |
| KQX57373.1 | KQX49785.1 | ASD33_27130 | ASD33_14070 | Ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.815 |
page 1 of 3