STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX49872.1Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)    
Predicted Functional Partners:
KQX53242.1
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.807
KQX49871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
KQX53240.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.778
KQX53243.1
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
    
  0.778
KQX47403.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.778
glgE
Alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
  0.778
KQX54498.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.778
KQX49869.1
FAD/NAD(P)-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
KQX49870.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
KQX49868.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.688
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.