STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX49991.1Alpha-1-antitrypsin; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)    
Predicted Functional Partners:
KQX53574.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.957
KQX49990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.903
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.716
KQX49596.1
Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.687
KQX50031.1
stearoyl-CoA 9-desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.596
KQX56125.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
KQX57960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.560
KQX59072.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.551
KQX53226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.551
KQX56377.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.551
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.