STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX50014.1Polynucleotide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)    
Predicted Functional Partners:
KQX50143.1
Polynucleotide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.969
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
     0.687
KQX55338.1
3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.672
KQX45544.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.655
KQX50013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.589
KQX59398.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.586
KQX59686.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.586
KQX59484.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.586
KQX59516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.586
KQX53638.1
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.586
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.