STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX49415.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)    
Predicted Functional Partners:
KQX49414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.991
KQX49412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.990
KQX49413.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.924
KQX49417.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
KQX50599.1
Branched-chain amino acid ABC transporter permease/ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
    
 
0.693
KQX59586.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.657
KQX53668.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.657
kptA
RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.654
KQX49642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.653
KQX49422.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.629
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.