STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX49506.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (826 aa)    
Predicted Functional Partners:
KQX49509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.860
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.832
KQX49507.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.809
KQX49508.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
KQX52697.1
Collagen alpha 1(II) chain precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
KQX56300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.654
KQX53150.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.635
KQX49505.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.623
KQX53420.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.609
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.