STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX47725.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
KQX47726.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.903
KQX53030.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.847
KQX55814.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.815
KQX47727.1
Rossmann fold nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.814
KQX55816.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.814
KQX47723.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.791
KQX57860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.784
KQX47724.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.757
KQX59699.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.755
KQX59659.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.749
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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