STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX47735.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
KQX52679.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.830
KQX53749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.785
rpsB
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.
       0.766
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
       0.618
KQX58958.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.549
KQX53392.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.549
KQX50577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.549
KQX49576.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.549
KQX46145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.549
KQX45590.1
Small secreted protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.549
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.