STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX47853.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
KQX45646.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.904
KQX46121.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.886
KQX50115.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.855
KQX47717.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.851
KQX59508.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.847
KQX47854.1
Recombinase RecB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.846
KQX53298.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.843
KQX56197.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.837
KQX45510.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.830
KQX57328.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.829
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.