STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX47304.1Peptidase; Extracellular zinc metalloprotease. (538 aa)    
Predicted Functional Partners:
ASD33_02780
Leupeptin-inactivating enzyme 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.598
KQX52722.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.586
KQX47546.1
Aminotransferase class V; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.555
KQX59332.1
Bacillolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
KQX47249.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M7 family.
  
   
 0.464
KQX51076.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
KQX53085.1
Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.435
KQX52782.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.432
KQX54984.1
Streptogrisin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.427
ku
DNA repair protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
       0.426
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.