STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX47368.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)    
Predicted Functional Partners:
KQX47369.1
Ser or Arg-related nuclear matrix protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
KQX47370.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
KQX47377.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.758
KQX47555.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.745
KQX47556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.700
KQX47371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.700
KQX47378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
mca
Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
     0.559
ASD33_21475
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
clpS
ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
    0.493
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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