STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX47412.1Peptidase M4; Extracellular zinc metalloprotease. (674 aa)    
Predicted Functional Partners:
KQX47411.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
KQX52722.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.564
KQX47410.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
KQX47249.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M7 family.
  
   
 0.532
KQX53085.1
Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.457
KQX52782.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.450
KQX47413.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.433
KQX54984.1
Streptogrisin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.425
KQX59332.1
Bacillolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.424
KQX51076.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.424
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.