KQX47570.1 protein (Streptomyces sp. Root1304)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KQX47570.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)

Predicted Functional Partners:

KQX47436.1

0.882

KQX47571.1

0.823

KQX47438.1

0.791

KQX47435.1

0.787

KQX47437.1

0.787

KQX47941.1

0.728

KQX57960.1

0.705

KQX58082.1

0.703

KQX53187.1

0.616

ASD33_15470

0.528

Your Current Organism:

Streptomyces sp. Root1304

NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASD33_15470	KQX47438.1	ASD33_15470	ASD33_21895	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
ASD33_15470	KQX47570.1	ASD33_15470	ASD33_21870	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
ASD33_15470	KQX47941.1	ASD33_15470	ASD33_19650	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.	0.432
ASD33_15470	KQX58082.1	ASD33_15470	ASD33_26780	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
KQX47435.1	KQX47436.1	ASD33_21880	ASD33_21885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KQX47435.1	KQX47437.1	ASD33_21880	ASD33_21890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KQX47435.1	KQX47438.1	ASD33_21880	ASD33_21895	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.892
KQX47435.1	KQX47570.1	ASD33_21880	ASD33_21870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
KQX47435.1	KQX47571.1	ASD33_21880	ASD33_21875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KQX47436.1	KQX47435.1	ASD33_21885	ASD33_21880	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KQX47436.1	KQX47437.1	ASD33_21885	ASD33_21890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KQX47436.1	KQX47438.1	ASD33_21885	ASD33_21895	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
KQX47436.1	KQX47570.1	ASD33_21885	ASD33_21870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
KQX47436.1	KQX47571.1	ASD33_21885	ASD33_21875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KQX47437.1	KQX47435.1	ASD33_21890	ASD33_21880	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KQX47437.1	KQX47436.1	ASD33_21890	ASD33_21885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KQX47437.1	KQX47438.1	ASD33_21890	ASD33_21895	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.892
KQX47437.1	KQX47570.1	ASD33_21890	ASD33_21870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
KQX47437.1	KQX47571.1	ASD33_21890	ASD33_21875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KQX47438.1	ASD33_15470	ASD33_21895	ASD33_15470	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534