STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX46362.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
    0.839
KQX46256.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.588
KQX46361.1
Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.566
KQX46257.1
Inosine-5'-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.560
KQX46263.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.553
KQX46258.1
acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
KQX53474.1
Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.525
KQX46262.1
Inosine-5'-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.476
KQX47526.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.456
KQX46261.1
Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.