STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX45544.1Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)    
Predicted Functional Partners:
KQX45695.1
Peptide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.811
KQX53574.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.800
KQX45543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.795
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.657
KQX50014.1
Polynucleotide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.655
KQX58746.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.654
KQX59624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.625
KQX49596.1
Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.588
KQX50597.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.586
KQX50143.1
Polynucleotide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.586
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.