STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQX57798.1Cellulose biosynthesis protein CelD; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)    
Predicted Functional Partners:
KQX57793.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.900
KQX57796.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.835
KQX57795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.816
KQX57797.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.804
ASD33_18700
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.793
KQX49453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
KQX57976.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
KQX47776.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
KQX47316.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
KQX52647.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
Your Current Organism:
Streptomyces sp. Root1304
NCBI taxonomy Id: 1736450
Other names: S. sp. Root1304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.