STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY18388.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)    
Predicted Functional Partners:
KQY17112.1
Antitermination protein NusB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.691
KQY17113.1
6,7-dimethyl-8-ribityllumazine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.691
KQY05040.1
Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.577
hppA
Pyrophosphatase; Pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
KQY17381.1
Cytochrome C556; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
KQY17212.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.485
KQY18322.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.485
KQY03694.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.485
KQY16005.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.485
KQY14982.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.485
Your Current Organism:
Rhizobium sp. Root1334
NCBI taxonomy Id: 1736456
Other names: R. sp. Root1334
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.