STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY17471.1Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)    
Predicted Functional Partners:
KQY10785.1
LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.760
KQY01910.1
succinate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.722
sucC
succinyl-CoA synthetase subunit beta; Catalyzes the interconversion of succinyl-CoA and succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.722
KQX98698.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.685
KQY17929.1
GcrA cell cycle regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.682
KQY14911.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.600
KQY17472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.596
KQY18426.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.584
KQY17573.1
ATP F0F1 synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
KQY03528.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.556
Your Current Organism:
Rhizobium sp. Root1334
NCBI taxonomy Id: 1736456
Other names: R. sp. Root1334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.