STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY10584.1Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)    
Predicted Functional Partners:
KQY10585.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
KQY03558.1
Hydroxyacylglutathione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.552
KQY02238.1
Hydroxyacylglutathione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.501
trpA
Tryptophan synthase subunit alpha; Catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.479
KQY11121.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
KQY05147.1
3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.454
Your Current Organism:
Rhizobium sp. Root1334
NCBI taxonomy Id: 1736456
Other names: R. sp. Root1334
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