STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY02570.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)    
Predicted Functional Partners:
KQY02571.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KQY02569.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.934
KQY02573.1
Methylthioribose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.901
KQY01895.1
Similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.881
KQY10718.1
Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.877
KQY02677.1
Ribose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.845
KQY02572.1
Methylthioribose-1-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
KQY10626.1
Ribose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.823
KQY03647.1
Transketolase; Catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.754
KQY14935.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.724
Your Current Organism:
Rhizobium sp. Root1334
NCBI taxonomy Id: 1736456
Other names: R. sp. Root1334
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