STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY15976.1Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)    
Predicted Functional Partners:
KQY15977.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.898
KQY11102.1
30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.732
KQY02625.1
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.663
KQY10909.1
Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.600
KQY05005.1
Methionine aminopeptidase; Catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.600
KQY15975.1
Creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.593
KQY15978.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
KQY03772.1
50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.556
KQY16027.1
precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.531
KQY05431.1
Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.500
Your Current Organism:
Rhizobium sp. Root1334
NCBI taxonomy Id: 1736456
Other names: R. sp. Root1334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.