STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY16063.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)    
Predicted Functional Partners:
KQY03756.1
Glucose-1-phosphate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.865
KQY16065.1
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.849
putA
Transcriptional regulator; Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.826
KQY16064.1
Amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
KQY16066.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.714
KQY16057.1
Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.686
KQY15982.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.684
KQY03732.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.663
KQY10468.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.655
KQY02152.1
Pyridoxamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.643
Your Current Organism:
Rhizobium sp. Root1334
NCBI taxonomy Id: 1736456
Other names: R. sp. Root1334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.