STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY31970.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
KQY31975.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.572
KQY31972.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.562
KQY31969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.558
KQY31968.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
KQY28503.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
KQY31974.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.532
KQY31967.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.523
fabG-2
3-ketoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
KQY39175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.453
KQY31971.1
Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.
       0.448
Your Current Organism:
Nocardia sp. Root136
NCBI taxonomy Id: 1736458
Other names: N. sp. Root136
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