STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQY99511.15-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (691 aa)    
Predicted Functional Partners:
KQY99630.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KQZ01587.1
Hydantoin utilization protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KQZ02369.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.856
KQY99510.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-glutamate cyclase family.
       0.716
KQZ02320.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
KQY98224.1
Integrase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.671
KQZ00587.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.641
KQZ01464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.626
KQY99509.1
TRAP transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.582
KQZ01585.1
Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.432
Your Current Organism:
Pseudolabrys sp. Root1462
NCBI taxonomy Id: 1736466
Other names: P. sp. Root1462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.