STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQZ00488.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (250 aa)    
Predicted Functional Partners:
KQZ01154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.947
ASD45_09470
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.943
KQZ01745.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.941
ASD45_17650
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.941
KQZ00405.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.940
KQZ01522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.940
KQY97511.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.940
KQY98236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.914
KQZ00487.1
Citramalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.892
KQZ00491.1
fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.891
Your Current Organism:
Pseudolabrys sp. Root1462
NCBI taxonomy Id: 1736466
Other names: P. sp. Root1462
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